Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793367.1_cds_XP_016433545.1_2885
CDS Infomation

[gene=LOC107760028] [db_xref=GeneID:107760028] [protein=transcription factor bHLH122-like] [protein_id=XP_016433545.1] [location=join(26752..27409,27968..28317,28500..28664,28751..28816,28909..28977,29087..29152)] [gbkey=CDS]
Sequence

ATGGATCATAGAAGTCATCAGCAGCAACAGATGACTTCTGGCTTAACTCGATATCGATCC
GCTCCGAGTTCTTATTTTTCCAGTCTTTTGAGTAGTAATAATCCTACTGCTGTTGTTAGT
GGAGGTGGTAATTGTGGTTATGCAAGAGATGATTTTGATCAGTTGCTCAATTCTCGTGCT
TCGAATACTGATGATGTAAAGCAAGTTTTCGATAGATTTGTGGCTAATATTGATCCCCAA
GATTTGAATCCGAATAATGGCCTAATTGGTGATACTCAGCAAATTCAGCAAAATCACATG
AGTAATATGAATGTTAGATCAGAGGGTGTAGCTCCTACGAAACAAGAACATGAGCAAAGC
CAAGCGCGACAGAGTCAGAATTCGCAGTTTATTGCAGCAGTGAAACAAGAAACTCAGCAA
AATAGTGATTATTCTTTGGCTTCACAAATGAATTATCAAACTCAAGCTCAACAAAATGAC
AATTCGGACCTTACGTCGGCCATGGATAATTTTGCCAGATTTTTGGGTGCGGCAGATTCA
AATCGTTTGAACCAGACGAAAATGGATGGTGGATTTGGTGCTGGTAGTAGTAATTCAAAT
CTTACTCGTTATAACAGTTCGCCTGCTGGATTCTTTGCACAATTTGATATTGAAAATGAA
TATGGTGCAATGAGAGGCATAGGGGGTTATGGAGCTGGTGGTAATGCTGCTGCCGAAGCA
TCATTTCCCACTCCAAACAGGTTTAGTAGTCAAACGGCTCTCCAATCCGGACAACCGCCT
TCTTCGGGGCTATTAGCTCCAATCTCTGTATTTGGAGCTAAAAGCATAGAAGAGGGCCGA
GCAGGCGATGAAAGTTTTGGTAAAGGCCATAAAAATGATGAGAGTTACATGACAGTTTTC
CCCATGCCTTCTTGGGATGATTCACAAATGTTGACTGATGATTTCCTTCAAGTACCAGAA
GATAATGAGGCCGAGCCGTTCTCCAATGTAAATGCATCTGATAATCAGAGTAGTGAAGGT
CGAGCTCGCCCTCCCACTCTGTTGTCTCATCTAAGTTTGCCTCAAACCTCAGCGGAGTTA
TCCGCCATGGAGAAGCTCTTGCAAGATTCAGTACCTTGTAAAGTCAGAGCAAAAAGAGGT
TGTGCCACTCATCCTCGTAGCATCGCTGAAAGGGTAAGAAGAACGCGAATTAGCGACAGA
ATGAGGAAGCTGCAAGATCTTGTTCCCAATATGGACAAGCAAACAAACACAGCAGATATG
TTGGACTTTGCAGCTGACTACATTAAAGAACTAGAGACACAAGTCAAGGCACTATCCGAA
AGGCGTTCGAAGTGTACATGCTCGAATAAAATAGAAGATCACATTCAAAAATGA

Peptide Sequence

PEP ID

XP_016433545.1
PEP Infomation

PREDICTED: transcription factor bHLH122-like [Nicotiana tabacum]
Sequence

MDHRSHQQQQMTSGLTRYRSAPSSYFSSLLSSNNPTAVVSGGGNCGYARDDFDQLLNSRA
SNTDDVKQVFDRFVANIDPQDLNPNNGLIGDTQQIQQNHMSNMNVRSEGVAPTKQEHEQS
QARQSQNSQFIAAVKQETQQNSDYSLASQMNYQTQAQQNDNSDLTSAMDNFARFLGAADS
NRLNQTKMDGGFGAGSSNSNLTRYNSSPAGFFAQFDIENEYGAMRGIGGYGAGGNAAAEA
SFPTPNRFSSQTALQSGQPPSSGLLAPISVFGAKSIEEGRAGDESFGKGHKNDESYMTVF
PMPSWDDSQMLTDDFLQVPEDNEAEPFSNVNASDNQSSEGRARPPTLLSHLSLPQTSAEL
SAMEKLLQDSVPCKVRAKRGCATHPRSIAERVRRTRISDRMRKLQDLVPNMDKQTNTADM
LDFAADYIKELETQVKALSERRSKCTCSNKIEDHIQK

Transcript Sequence

Gene sequence data has not been registered.